Survival-associated meQTLs across different cancer types


We identified 23,432 meQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "BLCA"
e.g., "rs11600543"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
KIRC rs11052153 chr12:32824689 C/T 1.79E-5 525 42.33 31.73 11.2 KM Plot
KIRC rs11052174 chr12:32840677 C/G 7.26E-5 527 43.03 31.07 12.83 KM Plot
KIRC rs11052204 chr12:32876580 A/T 7.39E-5 527 43.17 30.1 12.83 KM Plot
KIRC rs11052219 chr12:32917401 A/C 1.43E-5 517 43.43 24.57 8.73 KM Plot
KIRC rs11052225 chr12:32926752 C/T 9.3E-6 527 43.43 30.33 14.33 KM Plot
KIRC rs11052226 chr12:32926862 T/C 4.11E-5 526 44.3 29.78 12.83 KM Plot
KIRC rs11052227 chr12:32927550 C/T 1.26E-6 521 43.8 29.78 10.38 KM Plot
KIRC rs11071227 chr15:56130286 A/T 2.57E-10 518 2.3 36.12 39.7 KM Plot
KIRC rs11084406 chr19:56156447 A/G 2.32E-6 527 42.47 37.53 7.4 KM Plot
KIRC rs11132376 chr4:186928529 C/T 2.02E-5 513 44.67 31.07 37.27 KM Plot
KIRC rs111403388 chr21:44306756 G/C 4.35E-13 520 42.75 33.07 3.37 KM Plot
KIRC rs111405229 chr10:126210540 TCTC/T 5.12E-6 523 40 37.77 3.67 KM Plot
KIRC rs111422875 chr21:44295629 C/T 3.25E-13 523 42.75 32.42 3.37 KM Plot
KIRC rs111485799 chr21:44287486 G/C 4.35E-13 520 42.75 33.07 3.37 KM Plot
KIRC rs111586830 chr21:44336889 G/A 1.15E-6 514 42.47 32.42 11 KM Plot